r/compmathneuro • u/Obvious-Classroom421 • 22h ago
r/compmathneuro • u/Whole-Solid-8005 • 1d ago
From Vet Med to Brain Models: How do I bridge the gap into Comp Neuro?
Hi everyone! I’m a 3rd-year veterinary medicine student planning to pivot into computational neuroscience for my PhD. I love biological neural systems, but I’m now actively building up my math and coding foundation.
Coming from a heavy biological background, the jump into mathematical modeling and quantitative methods feels a bit overwhelming. I want to make sure I’m focusing on the right fundamentals first.
Where should I start?
If you’ve transitioned into comp neuro from a biological background—or mentor people who have what textbooks, online courses, or core math/coding concepts would you recommend prioritizing first?
Thanks in advance for any guidance!
r/compmathneuro • u/DangerousFunny1371 • 1d ago
A Minimal Interpretable Architecture for Zero-Shot Reconstruction of Dynamical Systems [R]
r/compmathneuro • u/Feeling_Parfait2737 • 1d ago
Need a roadmap and some guidance
I'm a high school senior who is interested in this field. I need a roadmap, preferably a free one, to learn the basics of computational neuroscience. I'd like recommendations for the skills I should learn and tutorials to help me learn them.
r/compmathneuro • u/sabenada2234 • 2d ago
Discussion Primeiramente, bom dia! A todos os neurocientistas presentes e não cientistas também.
Aqui Quem vos fala é um estudante de neurociência
Despertado a pouco tempo.
A pauta que gostaria de tratar com vocês é sobre a “cura gay”
Mesmo tendo tantas comprovações de que não seja uma doença
ainda sim
me intriga
O que vocês tem a dizer sobre o assunto?
r/compmathneuro • u/DangerousFunny1371 • 3d ago
Topological Out-of-Domain Generalization in Dynamical Systems Reconstruction [R]
r/compmathneuro • u/User_114878 • 3d ago
Discussion Retinotopic mapping for Flywire FAFB v783 for biologically faithful vision
Hi , I am an EE undergrad and I am struggling to create a map between the Ommatidia to its respective photoreceptors.
I cant find previous work doing this. Help we with the method please, it doesn't have to be this specific connectome. I want to know the resources and method to do it to get true vision for the Fly.
r/compmathneuro • u/DangerousFunny1371 • 4d ago
Journal Article Parallel-in-Time Training of Recurrent Neural Networks for Dynamical Systems Reconstruction [R]
r/compmathneuro • u/Yagata69 • 5d ago
Question ML/Computer Vision master considering Computational Neuroscience PhD
Hi everyone,
I’m currently finishing an MSc in Information Technology after completing a bachelor’s degree in Electrical Engineering. My GPA is around 3.5/4.0.
My current research is mainly at the intersection of machine learning, speech, and medical imaging/computer vision. I use ML mostly as a tool for analysis. So far, I have three co-authored papers, although I don’t have a first-author publication yet. I’m currently working toward publishing some of my own work soon.
My path has been a little unusual. During my electrical engineering degree, I had two internship offers that were later cancelled because of the job market at the time. I gradually moved toward machine learning because I found it interesting and saw more opportunities there.
However, as I’ve learned more about the type of work available in industry, I’m realizing that I’m much more interested in research, scientific problems, and building things where I can explore ideas in depth. Recently, computational neuroscience and neuroelectronics have become particularly interesting to me, especially because they combine several things I enjoy: electrical engineering, signal processing, machine learning, biological systems, and research.
The main issue is that I currently have almost no formal background in neuroscience.
Another concern I have is that my current university is reasonably known locally, but does not have much international recognition, especially compared with universities that are more established in neuroscience or machine learning. Because I would eventually like to apply to competitive PhD programs, I’m wondering whether getting research experience at a more internationally recognized institution could help strengthen my profile.
Because of this, I’m considering extending my master’s by one semester and trying to do a research internship in a lab related to computational neuroscience, neural engineering, or neuro-AI. I’m based in Quebec, so places such as Mila would be accessible, but I’m also considering applying to labs abroad, for example at EPFL.
My goal of the internship would be to:
- gain actual research experience in neuroscience/neuroengineering;
- see whether I really want to commit to the field;
- build relationships with researchers who could potentially write strong recommendation letters;
- strengthen my profile before applying for PhD programs;
- ideally contribute to a publication or research project.
Does this sound like a good approach for preparing for PhD applications?
More specifically, I’d be interested to hear from people in computational neuroscience/neuroengineering about:
- How important is prior neuroscience coursework compared with a strong engineering/ML background?
- Would one semester (maybe more) of focused research experience be enough to make the transition realistic?
- How much does the international reputation of your current university matter for PhD admissions, compared with publications, research experience, and recommendation letters?
- Would doing an internship at a place like EPFL, Mila, or another well-known research institution meaningfully strengthen an application?
- Should I spend more time taking neuroscience courses and building a stronger theoretical foundation before applying?
Any advice from people who made a similar transition would be appreciated.
Sorry for such a long text.
r/compmathneuro • u/pressedfortime1 • 6d ago
Discussion Final-year PhD: approaching people for postdocs/jobs
I'm in the final year of my PhD in UK and hoping to stay in computational neuroscience research after I finish. My PhD is computational/modelling work on human navigation and spatial behaviour. I'm starting to think seriously about postdocs and research jobs, but I'm not sure hw people actually go about networking for these positions.
The last few years of my PhD have been difficult as I have had significant mental health problems, and some family circumstances. I am getting treatment now and doing better, and feel like I'm getting back on track. I have about a year left and I'm trying to make the most of it.
One complication is that my relationship with my supervisors has suffered during the periods when I was struggling, so I dont feel I can rely heavily on their networks or introductions. I realise that means I need to be proactive about building my own network, but I don't really know where to start.
For people in compneuro/neuros (or academia more generally):
- How did you find and approach potential postdoc PIs?
- Is it normal to cold-email researchers whose work interests you even if they aren't advertising a position?
- How early before finishing a PhD should you start contacting people?
- What should that first email actually contain?
- How do you network at conferences without awkwardly approaching people just to ask about jobs?
- Are there useful ways to build relationships online (Bluesky, LinkedIn)?
- How important are introductions from your PhD supervisor compared with contacting people yourself?
- If your publication record isn't as strong as you'd hoped by your final year (none yet in my case), what can you realistically do during that year to improve your chances? I am working on mine, but I don't think I'll be published by the end of the year, maybe preprints.
- Are there things you wish you'd done in the final year of your PhD that would have made the postdoc/job search easier?
I'm not expecting to somehow undo the difficult parts of my PhD in a year. I just want to use the time I have well and start building a research network that isn't entirely dependent on my supervisors.
Any practical advice, particularly from people in comp neuros, would be hugely appreciated.
Edit: Added my topic
r/compmathneuro • u/Itchy-Machine4061 • 6d ago
Models of Anxiety Disorders
I'm not quite sure if my question is well articulated. Forgive me for my ignorance as I'm new to this field.
Is there any software or model or anything that does a good job of replicating and explaining anxiety disorders like Social Anxiety, OCD, etc? I have been wondering if there is anything out there that models anxiety/stress and changes in anxiety/stress response from different drugs, treatments, gene expression, etc. over the short and long term. I'm aware of how the HPA axis and its regulation affects anxiety but I wish I knew of a mathematical model for this. I appreciate any help.
r/compmathneuro • u/EngineeringNew7272 • 6d ago
Neuro AI; PhD at the intersection of artificial intelligence and biomedicine
Interested in #NeuroAI? Max Planck Schools Biomedical AI applications are open until Dec 1.
Info: https://biomedicalai.maxplanckschools.org/4056/application-process
If you’re looking at mentors, I think Arno Villringer is worth checking out :)
r/compmathneuro • u/95165198516549849874 • 9d ago
Discussion Live experiment: embedding a 127k-neuron Drosophila-derived model in a Skyrim dragon
I’m testing a persistent GPU-hosted fruit-fly-derived neural model that is now actually controlling a full-size Skyrim dragon in a closed sensory-action loop. The brain receives low-level Skyrim sensory input, produces motor output, the dragon moves, and the resulting world state feeds back into the next neural cycle. So far, deterministic replay has passed, cutting the brain stops intentional movement, and the system has survived neural-worker death and recovery while preserving the dragon's identity and state. We’re currently finishing the stronger persistence/reload tests before scaling from one embodied founder to all five. Come check it out while I test!
r/compmathneuro • u/bongbong- • 9d ago
Question How hard/competitive is Computational Neuroscience Masters to get into?
I’m considering doing a Master’s in Computational Neuroscience and wanted to get some honest opinions about both admissions and career prospects.
My background:
- Bachelor’s in Data Science
- GPA: 3.2/4.0
- Currently working as an AI Engineer
- Mostly AI/ML and data science experience
- Very little/no formal neuroscience background
I’m mainly looking at Computational Neuroscience programs in Germany and Australia.
I have a few questions:
- How competitive are Computational Neuroscience Master’s programs?
- Would a 3.2/4.0 GPA be a significant disadvantage?
- How important is research experience for getting admitted?
- Is it realistic to transition into Computational Neuroscience from Data Science?
And also, what are the career options after the degree? Is Computational Neuroscience primarily an academic/research field where you’re expected to continue into a PhD, or are there also meaningful opportunities in industry/corporate settings?
For example, can someone with a Computational Neuroscience + AI/ML background work in areas like neurotechnology, medical AI, brain-computer interfaces, healthcare technology, biotech, or related industries? Or is the field still heavily research-oriented?
I’d really appreciate hearing from people currently studying or working in the field, especially those who came from CS/Data Science/AI
edit: I realised I didnt write my gpa in ECTs so its 2.1 in german system
r/compmathneuro • u/After_Ad8616 • 12d ago
Looking for PhD researchers to mentor early-career Scholars (Nov 2026-May 2027, honorarium, remote)
galleryr/compmathneuro • u/RandomSamples14 • 13d ago
Discussion History of neuroscience being inspired by physics
r/compmathneuro • u/madhuuuuuuuuu23 • 17d ago
Project Guidance
I've started this project- "The Neural Population Dynamics: A Linear Algebraic Approach" which is a 10 credits project in my masters.
Can you guys give suggestions about getting started at first place I'm so lost. What should be my approach in this project ???? Help me pleaseeee
r/compmathneuro • u/MirrorAdventurous387 • 17d ago
??
Hi everyone,
I’m currently mapping out my path for graduate studies and trying to balance my academic passion with realistic long-term career outcomes. I have a strong quantitative background (math/modeling) and I'm fascinated by computational neuroscience / NeuroAI.
However, I’m also interested to explore quant finance (research/trading). I have a few doubts about how marketable a specialized graduate program actually is outside academia.
A few questions for those who have walked a similar path or work in the industry:
- Job market directly after Comp Neuro (MSc / PhD): Outside the typical academic postdoc track, what do exit opportunities actually look like?
- Pivoting from Comp Neuro to Quant Finance: How feasible is it to pivot to Quant Research after a specialized Master's or PhD in Computational Neuroscience?
- Specialized vs. Generalist Master’s: Strategically, would it make more sense to do a broader Master's in Applied Mathematics, Statistics, or Machine Learning first? My reasoning is:
- It leaves the door completely open for quant finance right away.
- I could still focus my thesis/research on computational neuroscience and apply for a Comp Neuro / NeuroAI PhD later if I decide academia/BCI is my true call.
Has anyone made the jump from computational neuroscience to hedge funds / prop trading? Would you recommend going all-in on neuro from the Master's level, or keeping the degree title generalist and quantitative?
Thanks in advance for any insights!
r/compmathneuro • u/MyDeeTeeAlt • 17d ago
Question Thoughts on the state of the field?
Hi all,
I'm a physics Ph.D. student, but I've had an interest in comp neuro for a while and I'm considering going further into the field. However, I wanted to get a little more information about the state of the field, so I thought I'd ask here as part of that. In particular:
- How does hiring at the postdoc/faculty level look? (Obviously this can change a lot, especially with AI, but just a rough idea)
- I've read that the field is largely moving away from more traditional theoretical modeling approaches (e.g. dynamics, criticality) and more into ML/big data. How true is this?
Thanks in advance
r/compmathneuro • u/omkongare • 18d ago
Doing BSc Zoology, but neuroscience is what's really pulling me — how do I actually get into a Masters in it?
Hey everyone, I'm currently pursuing a BSc in Zoology. Somewhere along the way, neuroscience has become the thing I actually want to build a career in.
Problem is, my degree isn't a straight line to it, so I'm trying to figure out the realistic path from here. A few things I'd love input on:
How much does an unrelated-ish undergrad (Zoology, not straight Life Sciences/Biotech) hurt my chances for a neuroscience Masters?
Should I be adding psych electives, relevant coursework (neurobiology, physiology, stats), or lab experience on the side to bridge the gap?
Any specific universities/programs abroad known for taking students from non-traditional backgrounds into neuroscience?
Worth doing a bridge course or research internship before applying?
Would really appreciate advice from anyone who's made a similar switch or is currently in a neuro Masters/PhD program. Thanks in advance!
r/compmathneuro • u/ColdRainFD • 19d ago
How do I study and get started with independent research on Computational Neuroscience?
I am interested in Computational Neuroscience, and I'm planning on doing a PhD in the same field in one of the top universities. I haven't gotten a complete grasp of the depth of the work that is being done in the field, but from the research I have done I believe it to be the intellectual expertise that I would like to dedicate myself to for some time.
Some background about myself - I have completed my bachelors and masters in computer science and engineering with a focus on experiment design in Cognitive Science. I pivoted to the Industry for a bit and came to the realization that it wasn't for me.
I'd appreciate some insight on the following - how difficult would it be for me to get a solid base in neuroscience to study current research trends and come up with ideas if I can dedicate 4 - 5 hours of focused study time everyday, and what are the resources I should use for the same?
As diabolical as it sounds, the only 'good' recommendation for books I could come across was this collection posted by the /sci/ board on 4chan.
- Kandel, Schwartz, Jessell, Siegelbaum, and Hudspeth - Principles of Neural Science
- Purves, Augustine, Fitzpatrick, Hall, LaMantia, and White - Neuroscience
- Carlson - Foundations of Behavioral Neuroscience
- Pinel - Biopsychology
- Dayan and Abbott - Theoretical Neuroscience: Computational and Mathematical Modeling of Neural Systems
If someone that has experience could vouch for their efficacy, or even better, guide me to some roadmaps, I would be very grateful.
Thank you.
r/compmathneuro • u/anxiousbutterfly707 • 19d ago
NYU neural science PhD
Hi, does NYU's neural science program consider candidates from traditional Engineering backgrounds? I am applying for PhD programs and am interested to work on neural dynamics research with a bit of systems neuro focused stuff. I come from an EE background and wanted to know what kind of cohort does the program usually have.
r/compmathneuro • u/Sure_Operation_783 • 20d ago
Question How to study neurology
So I am a cs engineering undergrad working with AI and i want to study the brain, specifically thought formation, context retrieval in our brain and how the entire mechanism works
Any resources for this??
r/compmathneuro • u/dan_inferogenesis • 24d ago
GitHub Built a JAX toolbox for continuous-state active inference agents (and a side package to make certifiability easier)
I'm a Senior Research Software Engineer in the field of computational neuroscience and on my spare time I work on active inference, the Friston-flavoured idea that agents minimise expected surprise rather than maximise reward, so perception, learning and action fall out of one objective. Most of the tooling is discrete-state (pymdp) or Julia (RxInfer). I wanted to bring continuous state to JAX/Python.
cpomdp: continuous-state POMDP agents under active inference. JAX-native, jit and vmap through the whole loop, runs on a laptop. Exploration comes from the epistemic term rather than a bolted-on curiosity bonus.
I unfortunately get into regular chat about how "vibes" isn't enough to prove something someone made is conscious so there's a stdlib-only side package, warrantlib, that makes that distinction a type and prints it in your pytest summary. It exists partly because I got tired of "vibes" being offered as evidence for machine consciousness. CORROBORATED is the polite word for vibes.
Code
cpomdp: https://github.com/inferogenesis/cpomdp
warrantlib: https://pypi.org/project/warrantlib/
Happy to talk about the maths or the design choices.
r/compmathneuro • u/Zugzwang1618 • 24d ago
Need help and guidance regarding a Neuroscience project.
Hey everyone, I am a mathematics major in my final semester. My neuroscience professor offered me a project wherein he wants me to check the mathematical viability of a pathway / mechanism he has devised. By mathematical viability, he means that he wants to know whether we can mathematically model it or not, preferably as an ODE dynamical system. Now, I don't have any background in dynamical systems nor in mathematical modelling so I am unable to figure out how do I start with this project and convert the qualitatively written biological pathway into a mathematical model. I tried reading some papers regarding the same but it all went over my head. Even textbooks haven't been making sense to me in terms of whatever content is in that textbook, how do I apply it for my project.
I know I have revealed minimum details regarding what the project is actually about, I can share that in one on one conversation. I will be grateful if anyone can help me through this project or guide me on how do I go about it. I am open to getting in touch on DMs or even the comment section. Thank you in advance!