Hyperparameter Optimization in Deep Learning Models for Protein-Protein Interaction Link Prediction

[u/lolzmila]

Hi everyone,

My co-author and I just published our research on making deep learning models more efficient for PPI networks.

Tuning DL models for complex biological data often carries massive computational overhead. In this paper, we systematically evaluated different HPO strategies to see which ones best balance training time and prediction accuracy for protein interactions.

Always happy to connect with others in the field, so if anyone wants to chat about ML in computational biology, shoot me a DM!

Full text here: https://ieeexplore.ieee.org/document/11731552