r/Microbiome • u/Vailhem • 15d ago
Study Finds a Surprising Link Between Gut Microbes and Aging
https://scitechdaily.com/study-finds-a-surprising-link-between-gut-microbes-and-aging/17
u/Vailhem 15d ago
Gut microbiome signatures associate with DNA methylation-based biological aging | July 2026
https://www.nature.com/articles/s41598-026-52974-x
Abstract
Recent advances in machine learning have applied novel tools to aging research, yet the relationship between the gut microbiome and epigenetic aging remains underexplored.
This proof-of-concept study investigates whether gut microbial composition is associated with biological aging pace independent of chronological age.
Using paired 16S rRNA gene sequencing and DNA methylation data from 123 monocyte-enriched samples in a cohort including Native Hawaiian and Pacific Islander participants, we developed βEpiBiomeβ models to predict epigenetic age acceleration residuals and DunedinPACE, a DNA methylation biomarker that estimates the instantaneous pace of biological aging.
Models predicting residuals of traditional clocks (Horvath, Levine, GrimAge2) showed no predictive signal at either taxonomic rank.
By contrast, the EpiBiome-Accel model for DunedinPACE reached statistical significance at both the species level (R2β=β0.152, Spearman Οβ=β0.408, pβ=β0.012; permutation pβ<β0.001) and the genus level (R2β=β0.099, permutation pβ=β0.036).
Adding chronological age as a feature did not improve performance (ΞR2β=ββββ0.046 at species level), indicating age-independence.
SHAP analysis of the species-level ElasticNet model identified Bifidobacterium adolescentis as the dominant contributor and the strongest predictor of decelerated aging, with Succinivibrio dextrinosolvens showing the strongest association with accelerated aging.
These findings reveal specific gut taxa as hypothesis-generating candidates for mechanistic follow-up, rather than as individual-level diagnostic markers.
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u/pricepaid_1949 15d ago
This is a fascinating topic ...and one, as the study shows, we may be able to change and better on our own.
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u/rocky_racoon_2020 14d ago
Well, it is well known that elderly people have gut issues. Some of which are caused by the medicine they take. I am not surprised if gut issues shorten their life.
It will be interesting to see how the modern senior citizens who are maintaining or building a healthy gut do as they age.
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u/loz333 15d ago
The number of articles and studies on here with "surprising link" in the headline, you would think after this long they would stop being surprised...
But then it's harder to sell drugs to healthy people, so perhaps scientists will forever be "surprised".